GSM3500822: 2: WT_FRL; Chlorogloeopsis fritschii PCC 9212; RNA-Seq - SRA

SRX5095210: GSM3500822: 2: WT_FRL; Chlorogloeopsis fritschii PCC 9212; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 47.1M spots, 7.1G bases, 2.5Gb downloads

Submitted by: NCBI (GEO)

Study: Chlorogloeopsis sp. PCC 9212 wild type and mutants in response to erythromycin and light colors

PRJNA508366 • SRP172485 • All experiments • All runs

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This transcription profiling analysis of Chlorogloeopsis sp. PCC 9212 is designed to study the role of RfpA, RfpB, and RfpC in response to light color change Overall design: Chlorogloeopsis sp. PCC 9212 wild type and mutants cells were cultured in white light and far-red light with or without the supplement of erythromycin

Sample: 2: WT_FRL

SAMN10519744 • SRS4106797 • All experiments • All runs

Organism: Chlorogloeopsis fritschii PCC 9212

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: Cells were harvested, immediately frozen in liquid nitrogen, and stored at -80 oC. Total RNA was extracted with phenol and further purified with High Pure RNA Isolation Kit (Roche, Indianapolis,IN). Ribosomal RNA was removed using Ribo-Zero rRNA Removal Kit (Bacteria) (Illumina, Inc.) Library was generated by using the TruSeq Stranded mRNA Kit with skipping of poy(A) selection (Illumina, Inc.)

Experiment attributes:

GEO Accession: GSM3500822

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 47.1M spots, 7.1G bases, 2.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR8280377	47,072,130	7.1G	2.5Gb	2018-12-06

ID:: 6871672

SRA

Sequence Read Archive

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